南宁网站建设 超博网络,在什么网站做外贸,html大学设计论文,网站制作中英文天津1写在前面 分享一下最近看到的2篇paper关于骨骼肌组织的细胞Marker#xff0c;绝对的Atlas级好东西。#x1f44d; 希望做单细胞的小伙伴觉得有用哦。#x1f60f; 2常用marker#xff08;一#xff09; general_mrkrs - c( MYH7, TNNT1, TNNT3, MYH1, MYH2, C… 1写在前面 分享一下最近看到的2篇paper关于骨骼肌组织的细胞Marker绝对的Atlas级好东西。 希望做单细胞的小伙伴觉得有用哦。 2常用marker一 general_mrkrs - c( MYH7, TNNT1, TNNT3, MYH1, MYH2, CKM, MB, # Myofibers PAX7, DLK1, # MuSCs PDGFRA, DCN, ANGPTL7, OSR2, NGFR, SLC22A3,ITGA6, # Fibroblasts FMOD, TNMD , MKX, # Tenocytes MPZ, MBP, # Schwann cellsCDH2, L1CAM, # SCGMSLN, ITLN1, # mesotheliumADIPOQ, PLIN1, # adipocytesPTPRC, CD3D, IL7R, # T cellsNKG7, PRF1, #NK cellsCD79A, TCL1A, # B cellsMZB1, JCHAIN, # B plasma CD14, FCGR3A,S100A8, S100A12, # MonoCD163, C1QA, # MacropXCR1, CLEC9A, # cDC1 CADM1,CD1C, CLEC10A, CCR7, # cDC2LILRA4, IL3RA, IRF7, # pDC FCGR3B, CSF3R, SORL1, # NeutrophilsEPX, PRG2, # Eosinophils CLCTPSB2, MS4A2, # Mast cellsPECAM1, HEY1,CLU, # art ECCA4, LPL, # capECACKR1, SELE, # venECLYVE1, TFF3, # lymphECRGS5,ABCC9, # pericytes MYH11, ACTA2, # SMCHBA1, #RBC ) 出自下面paper: Human skeletal muscle aging atlas. Veronika R. Kedlian, Yaning Wang, Tianliang Liu, Xiaoping Chen, Liam Bolt, Catherine Tudor, Zhuojian Shen, Eirini S. Fasouli, Elena Prigmore, Vitalii Kleshchevnikov, Jan Patrick Pett, Tong Li, John E G Lawrence, Shani Perera, Martin Prete, Ni Huang, Qin Guo, Xinrui Zeng, Lu Yang, Krzysztof Polański, Nana-Jane Chipampe, Monika Dabrowska, Xiaobo Li, Omer Ali Bayraktar, Minal Patel, Natsuhiko Kumasaka, Krishnaa T. Mahbubani, Andy Peng Xiang, Kerstin B. Meyer, Kourosh Saeb-Parsy, Sarah A Teichmann Hongbo Zhang 2024 Apr. 3常用marker二 Mural Cell Markers #SMOOTH MUSCLE CELLSFeaturePlot(df.harmony, features MYH11, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features ACTA2, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features TAGLN, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) #PERICYTESFeaturePlot(df.harmony, features RGS5, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features CSPG4, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features PDGFRB, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) Glial Cells Markers FeaturePlot(df.harmony, features PROX1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features MPZ, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features NCAM1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features CDH19, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features SOX10, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features PLP1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) Adipocites Markers FeaturePlot(df.harmony, features PLIN1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features ADIPOQ, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features MMRN1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features CCL21, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) Tenocytes Markers FeaturePlot(df.harmony, features FMOD, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features TNMD, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features COL22A1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features SCX, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features DLG2, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features FBN1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) Endothelial Markers #FeaturePlot(df.harmony, features PCDHA6, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)#ARTERIAL FeaturePlot(df.harmony, features FBLN5, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features DLL4, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features SEMA3G, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)#CAPILLARIESFeaturePlot(df.harmony, features RGCC, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)#VENOUSFeaturePlot(df.harmony, features EPHB4, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) Myonuclei Markers FeaturePlot(df.harmony, features TTN, min.cutoff q9, order T, cols c(lightblue, navy), raster FALSE)#IMMATURE MYOCYTEFeaturePlot(df.harmony, features MYMX, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features MYOG, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)#REG MYONUCLEIFeaturePlot(df.harmony, features FLNC, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features MYH3, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features MYH8, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features XIRP1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) NMJ Myonuclei Markers (Neuromuscular junction) #NMJFeaturePlot(df.harmony, features CHRNE, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features CHRNA1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features PRKAR1A, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features COL25A1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features UTRN, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features COLQ, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features ABLIM2, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features VAV3, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features UFSP1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) MTJ Myonuclei Markers (Myotendinous junction) #MTJFeaturePlot(df.harmony, features COL22A1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features PIEZO2, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features COL24A1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features COL6A1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features FSTL1, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features COL6A3, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(df.harmony, features TIGD4, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE)FeaturePlot(mini_df.harmony.harmony, features EYS, min.cutoff q9, order TRUE, cols c(lightblue, navy), raster FALSE) 出自下面paper: Lai, Y., Ramírez-Pardo, I., Isern, J. et al. Multimodal cell atlas of the ageing human skeletal muscle. Nature (2024). 最后祝大家早日不卷!~ 点个在看吧各位~ ✐.ɴɪᴄᴇ ᴅᴀʏ 〰 往期精彩 LASSO | 不来看看怎么美化你的LASSO结果吗 chatPDF | 别再自己读文献了让chatGPT来帮你读吧~ WGCNA | 值得你深入学习的生信分析方法~ ComplexHeatmap | 颜狗写的高颜值热图代码 ComplexHeatmap | 你的热图注释还挤在一起看不清吗 Google | 谷歌翻译崩了我们怎么办附完美解决方案 scRNA-seq | 吐血整理的单细胞入门教程 NetworkD3 | 让我们一起画个动态的桑基图吧~ RColorBrewer | 再多的配色也能轻松搞定~ rms | 批量完成你的线性回归 CMplot | 完美复刻Nature上的曼哈顿图 Network | 高颜值动态网络可视化工具 boxjitter | 完美复刻Nature上的高颜值统计图 linkET | 完美解决ggcor安装失败方案附教程 ...... 本文由 mdnice 多平台发布
